BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024E08LP1|AL428232
(933 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1128 1428 0.0
>3x_Contig1128
Length = 4759
Score = 1428 bits (719), Expect = 0.0
Identities = 725/727 (99%)
Strand = Plus / Minus
Query: 1 gatcacattctttatgctgcaaagtcaatgcaaaagggtgattacttacaatcgatcgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 899 gatcacattctttatgctgcaaagtcaatgcaaaagggtgattacttacaatcgatcgaa 840
Query: 61 tatttgaggaaaatttctgtgtggtctttgttgagtaaatctgatgatatcatcaaccaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 839 tatttgaggaaaatttctgtgtggtctttgttgagtaaatctgatgatatcatcaaccaa 780
Query: 121 ctaagtgaaaaggttcaaattgaaactttgaaaacttacattttcacttacaagagattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 ctaagtgaaaaggttcaaattgaaactttgaaaacttacattttcacttacaagagattc 720
Query: 181 tactctaaaatatccatttctaaattatcgaaattgtttgatcttgatatcgaaaaggtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 tactctaaaatatccatttctaaattatcgaaattgtttgatcttgatatcgaaaaggtt 660
Query: 241 ttggctgtagcacaaaacatcatcaatgattacgaagttaaagccaaattggatgaaaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 ttggctgtagcacaaaacatcatcaatgattacgaagttaaagccaaattggatgaaaat 600
Query: 301 aacgaatacattatcttcgaaagaggcgaagaaatcacaaagttagaagaagttgccatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 aacgaatacattatcttcgaaagaggcgaagaaatcacaaagttagaagaagttgccatc 540
Query: 361 aagttagttaaagaaaccaagtaccactctgaacgtttacgccagttaacattttcattc 420
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 539 aagttagttaaagaaaccaagtaccactctgaacgtttacgccagtaaacattttcattc 480
Query: 421 ttcgttcagcagataaggtcagtttctaattgtagcactcaccttccatacacataacaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 ttcgttcagcagataaggtcagtttctaattgtagcactcaccttccatacacataacaa 420
Query: 481 aatttgctcttccttcttttgttcacttaccgtgcgcatattaatagacagagtcgttgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 aatttgctcttccttcttttgttcacttaccgtgcgcatattaatagacagagtcgttgg 360
Query: 541 caaagaacctttgttttagcatttgcaataaatactagtatttgtacattatcgataata 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 caaagaacctttgttttagcatttgcaataaatactagtatttgtacattatcgataata 300
Query: 601 tataacatagttctcactgtaggcaattacgtagtttttgaaatcaattaattgaatttt 660
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 tataacacagttctcactgtaggcaattacgtagtttttgaaatcaattaattgaatttt 240
Query: 661 ggagacatataacatctcgaacattgactcgtaacaatacagtttatgcgctggttcatt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 ggagacatataacatctcgaacattgactcgtaacaatacagtttatgcgctggttcatt 180
Query: 721 ctatata 727
|||||||
Sbjct: 179 ctatata 173
Score = 201 bits (101), Expect = 3e-51
Identities = 146/159 (91%), Gaps = 2/159 (1%)
Strand = Plus / Minus
Query: 742 acacatttatggacaaatgtatgttatcagttggaataaaccacttaccttgctagttat 801
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 158 acacatttatggacaaatgtatgttatcagttggaataa-ccacttaccttgctagttat 100
Query: 802 acatggttagaggratatcatcccatatttatttatattatcggttaatgaacgtctgac 861
||||||||||||| |||||||||||||||| | | || ||||||| ||||||||||
Sbjct: 99 acatggttagaggaatatcatcccatatttccccacctcattggttaattaacgtctgac 40
Query: 862 gaactggaataattttcagttcctttttactataacttt 900
||||||| || ||||||||||||||||||||||||||||
Sbjct: 39 gaactggtat-attttcagttcctttttactataacttt 2
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,289
Number of Sequences: 1807
Number of extensions: 11289
Number of successful extensions: 114
Number of sequences better than 1.0e-20: 1
length of query: 933
length of database: 10,358,551
effective HSP length: 16
effective length of query: 917
effective length of database: 10,329,639
effective search space: 9472278963
effective search space used: 9472278963
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)